{"id":405,"date":"2022-04-13T16:15:19","date_gmt":"2022-04-13T08:15:19","guid":{"rendered":"https:\/\/linguopeng.top\/?p=405"},"modified":"2022-04-13T16:15:20","modified_gmt":"2022-04-13T08:15:20","slug":"qiime2","status":"publish","type":"post","link":"https:\/\/linguopeng.top\/?p=405","title":{"rendered":"qiime2"},"content":{"rendered":"\n<pre class=\"wp-block-code\"><code>################\u751f\u6210\u7279\u5f81\u8868\u548c\u4ee3\u8868\u5e8f\u5217########\ncd \/home\/data\/ssy051\/container\/qiime2-2019.7_ceshi-yes\nnohup docker run --rm -v \/home\/data\/ssy051\/container\/qiime2-2019.7_ceshi-yes:\/home \\\r\n--name=qiime2.test 8e2a626d4c8d  qiime dada2 denoise-paired \\\r\n --i-demultiplexed-seqs \/home\/seqs\/demux.qza \\\r\n --p-trim-left-f 17 --p-trim-left-r 20 \\\r\n --p-trunc-len-f 260 --p-trunc-len-r 260 \\\r\n --o-table \/home\/results\/table.qza \\\r\n --o-representative-sequences \/home\/results\/rep-seqs.qza \\\r\n --o-denoising-stats \/home\/results\/denoising-stats.qza --p-n-threads 40 &amp;\r\n\r####################\u7269\u79cd\u6ce8\u91ca###############\nnohup docker run --rm -v \/home\/data\/ssy051\/container\/qiime2-2019.7_ceshi-yes:\/home \\\r\n--name=qiime2.test 8e2a626d4c8d qiime feature-classifier classify-sklearn \\\r\n  --i-classifier \/home\/silva-132-99-nb-341F-806R_classifier.qza\\\r\n  --i-reads \/home\/results\/rep-seqs.qza \\\r\n  --o-classification \/home\/results\/taxa\/taxonomy.qza --p-n-jobs 40 &amp;<\/code><\/pre>\n","protected":false},"excerpt":{"rendered":"","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[1],"tags":[],"class_list":["post-405","post","type-post","status-publish","format-standard","hentry","category-uncategorized"],"_links":{"self":[{"href":"https:\/\/linguopeng.top\/index.php?rest_route=\/wp\/v2\/posts\/405","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/linguopeng.top\/index.php?rest_route=\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/linguopeng.top\/index.php?rest_route=\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/linguopeng.top\/index.php?rest_route=\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/linguopeng.top\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=405"}],"version-history":[{"count":1,"href":"https:\/\/linguopeng.top\/index.php?rest_route=\/wp\/v2\/posts\/405\/revisions"}],"predecessor-version":[{"id":406,"href":"https:\/\/linguopeng.top\/index.php?rest_route=\/wp\/v2\/posts\/405\/revisions\/406"}],"wp:attachment":[{"href":"https:\/\/linguopeng.top\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=405"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/linguopeng.top\/index.php?rest_route=%2Fwp%2Fv2%2Fcategories&post=405"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/linguopeng.top\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=405"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}