{"id":498,"date":"2022-05-18T08:51:29","date_gmt":"2022-05-18T00:51:29","guid":{"rendered":"https:\/\/linguopeng.top\/?p=498"},"modified":"2022-05-18T08:51:30","modified_gmt":"2022-05-18T00:51:30","slug":"eggnong%e6%95%b0%e6%8d%ae%e5%ba%93%e6%9c%ac%e5%9c%b0%e7%89%88%e6%b3%a8%e9%87%8a%e6%ad%a5%e9%aa%a4","status":"publish","type":"post","link":"https:\/\/linguopeng.top\/?p=498","title":{"rendered":"eggnong\u6570\u636e\u5e93\u672c\u5730\u7248\u6ce8\u91ca\u6b65\u9aa4"},"content":{"rendered":"\n<pre class=\"wp-block-code\"><code>#\u6765\u6e90\u4e8ehttps:\/\/mp.weixin.qq.com\/s\/j901X2DYQhyFXGRNEFaoaQ\n\r#eggnog-mapper\u8f6f\u4ef6\u6765\u5bf9\u57fa\u56e0\u505a\u529f\u80fd\u6ce8\u91ca\uff0c\u7531\u4e8e\u9700\u8981\u6ce8\u91ca\u7684\u57fa\u56e0\u670910\u4e07\u6761\uff0c\u5728\u7ebf\u7248\u5355\u6b21\u53ea\u652f\u63015000\n#\u6761\u5e8f\u5217\u56e0\u6b64\u4f7f\u7528\u672c\u5730\u7248\u6765\u8fdb\u884c\u6ce8\u91ca\nconda create -n eggnog-mapper -c bioconda eggnog-mapper\r\n#\u4e0b\u8f7d\u6570\u636e\u5e93\u89e3\u538b\u7f29\r\naxel -an50 http:\/\/eggnog5.embl.de\/download\/emapperdb-5.0.2\/eggnog.db.gz\r\naxel -an50 http:\/\/eggnog5.embl.de\/download\/emapperdb-5.0.2\/eggnog_proteins.dmnd.gz\r\n#\u4f7f\u7528\r\npython \/home\/abc\/miniconda3\/bin\/emapper.py -i \/home\/abc\/Desktop\/pep.fa\r\n--output \/home\/abc\/Desktop\/At -m diamond --cpu 35\r\n--seed_ortholog_evalue 1e-5\r\n--dmnd_db \/data\/public\/database\/eggnog\/eggnog_proteins.dmnd\r\n--data_dir \/data\/public\/database\/eggnog\/eggnog.db\r\n\r\n#\u6ce8\u610f\u9700\u8981\u5199\u5bf9\u8f6f\u4ef6\u7684\u8def\u5f84\u53ca\u6570\u636e\u5e93\u76f8\u5bf9\u5e94\u5f97\u8def\u5f84\uff0c\u672c\u6b21\u4f7f\u752835\u4e2a\u7ebf\u7a0b\u6765\u8fdb\u884c\u6ce8\u91ca\u8fd8\u662f\u76f8\u5f53\u5feb\u7684\uff0c\u6b64##\u5916\u8be5\u7a0b\u5e8f\u5bf9\u5185\u5b58\u5f97\u5360\u7528\u4e0d\u662f\u5f88\u9ad8<\/code><\/pre>\n","protected":false},"excerpt":{"rendered":"","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[1],"tags":[],"class_list":["post-498","post","type-post","status-publish","format-standard","hentry","category-uncategorized"],"_links":{"self":[{"href":"https:\/\/linguopeng.top\/index.php?rest_route=\/wp\/v2\/posts\/498","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/linguopeng.top\/index.php?rest_route=\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/linguopeng.top\/index.php?rest_route=\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/linguopeng.top\/index.php?rest_route=\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/linguopeng.top\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=498"}],"version-history":[{"count":1,"href":"https:\/\/linguopeng.top\/index.php?rest_route=\/wp\/v2\/posts\/498\/revisions"}],"predecessor-version":[{"id":499,"href":"https:\/\/linguopeng.top\/index.php?rest_route=\/wp\/v2\/posts\/498\/revisions\/499"}],"wp:attachment":[{"href":"https:\/\/linguopeng.top\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=498"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/linguopeng.top\/index.php?rest_route=%2Fwp%2Fv2%2Fcategories&post=498"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/linguopeng.top\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=498"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}